survClasses: Survival Cliques Class

In cavei/survClip: Survival Analysis for Pathways

Description

Class to describe and represent survival analysis on modules

Class to describe and represent survival analysis on modules

Details

For internal use only

For internal use only

Slots

alphas

Object of class "numeric". It contains pvalues of the cliques/modules

zlist

Object of class "list". For each cliques, the list of pvalues for all the covariates

cliques

Object of class "list". The list of the genes in the cliques

coxObjs

Object of class "list". For each cliques, the object used for Coxph analysis

cliquesLoadings

Object of class "list". For each cliques, the loadings as calculated by the PCA

cliquesExpr

Object of class "list". For each cliques, the cliques expression

pvalue

Object of class "numeric". It contains the pvalue of the whole model generated by the analysis

zlist

Object of class "numeric". vector of pvalues for all the covariates

coxObj

Object of class "data.frame". The object used for Coxph analysis

loadings

Object of class "matrix". The loadings as calculated by the PCA

method

Object of class "character". Type of method used

Examples

showClass("survCliques")

showClass("survPath")

cavei/survClip documentation built on June 19, 2019, 8:46 p.m.