best_clust_yeast_obj: TMixClust object containing the optimal clustering solution...

In cbg-ethz/TMixClust: Time Series Clustering of Gene Expression with Gaussian Mixed-Effects Models and Smoothing Splines

Description

This object contains the result of clustering and stability analysis corresponding to the clustering solution with the highest likelihood among 10 different runs of clustering on the yeast data with K=4 clusters.

Usage

best_clust_yeast_obj

Format

A TMixClust object.

Value

optimal clustering solution for the yeast data

Author(s)

Monica Golumbeanu, [e-mail]

References

Golumbeanu M, Desfarges S, Hernandez C, Quadroni M, Rato S, Mohammadi P, Telenti A, Beerenwinkel N, Ciuffi A. (2017) Dynamics of Proteo-Transcriptomic Response to HIV-1 Infection.

Examples

# Load the optimal clustering solution for the yeast data
# provided with the TMixClust package
data("best_clust_yeast_obj")

# Print the first lines of the yeast clustering object
head(best_clust_yeast_obj)

cbg-ethz/TMixClust documentation built on May 30, 2019, 8:28 a.m.