Files in cbg-ethz/gespeR
Gene-Specific Phenotype EstimatoR
.gitignore
DESCRIPTION
NAMESPACE
R/Phenotypes-class.R
R/TargetRelations-class.R
R/gespeR-class.R
R/gespeR-concordance.R
R/gespeR-functions.R
R/gespeR-generics.R
R/gespeR-methods.R
R/gespeR-package.R
README.md
data/stabilityfits.RData
inst/example/data_simulation.R
inst/example/gespeR-example.R
inst/extdata/Phenotypes_screen_A.txt
inst/extdata/Phenotypes_screen_B.txt
inst/extdata/Phenotypes_screen_C.txt
inst/extdata/Phenotypes_screen_D.txt
inst/extdata/TR_screen_A.rds
inst/extdata/TR_screen_B.rds
inst/extdata/TR_screen_C.rds
inst/extdata/TR_screen_D.rds
man/.Rapp.history
man/Phenotypes-class.Rd
man/TargetRelations-class.Rd
man/annotate.gsp-methods.Rd
man/as.data.frame-Phenotypes-method.Rd
man/as.data.frame.concordance.Rd
man/c-Phenotypes-method.Rd
man/concordance.Rd
man/dim-Phenotypes-method.Rd
man/gespeR-class.Rd
man/gespeR-package.Rd
man/gspssp-methods.Rd
man/join-methods.Rd
man/lasso.rand.Rd
man/na.rem-methods.Rd
man/path-methods.Rd
man/plot.Phenotypes.Rd
man/plot.concordance.Rd
man/plot.gespeR.Rd
man/rbo.Rd
man/scores-methods.Rd
man/simData.Rd
man/stability-methods.Rd
man/stability.selection.Rd
man/stabilityfits.Rd
man/sub-Phenotypes-ANY-ANY-ANY-method.Rd
man/sub-TargetRelations-ANY-ANY-ANY-method.Rd
man/target-relations-methods.Rd
man/trmatrix-methods.Rd
man/values-methods.Rd
vignettes/gespeR-concordance.tex
vignettes/gespeR.Rnw
vignettes/gespeR.log
vignettes/gespeR.pdf
vignettes/gespeR.synctex.gz
vignettes/gespeR.tex
vignettes/gespeR.toc
vignettes/tmp/gespeR-plot_concordance-1.pdf
vignettes/tmp/gespeR-plot_concordance-2.pdf
vignettes/tmp/gespeR-plot_cv-1.pdf
vignettes/tmp/gespeR-plot_phenotypes-1.pdf
vignettes/workflow/gespeR_GSPs.rds
vignettes/workflow/gespeR_deconvolute_screens.Rmd
vignettes/workflow/gespeR_deconvolute_screens.html
vignettes/workflow/gespeR_fits.rds
