Man pages for cbg-ethz/gespeR
Gene-Specific Phenotype EstimatoR

annotate.gsp-methodsannotate.gsp
as.data.frame.concordanceCoerce method
as.data.frame-Phenotypes-methodConvert Phenotypes object to a data.frame
concordanceEvaluate the concordance between Phenotype objects
c-Phenotypes-methodConcatenate Phenotypes objects
dim-Phenotypes-methodDimension of a 'Phenotypes' object
gespeR-classgespeR
gespeR-packagePackage: Gene-Specific Phenotype EstimatoR
gspssp-methodsRetrieve GSPs and SSPs from 'gespeR' objects
join-methodsjoin
lasso.randRandomized Lasso
na.rem-methodsRemove NA/Inf values from phenotype vectors
path-methodspath
Phenotypes-classPhenotypes
plot.concordancePlot concordance
plot.gespeRPlot method for 'gespeR' objects
plot.PhenotypesPlot method for Phenotype objects
rboRank biased overlap (Webber et al., 2010)
scores-methodsscores
simDataExample data: Simulated phenotypes and target relations for 4...
stabilityfitsExample fits for phenotypes from simulated screening data A,...
stability-methodsstability
stability.selectionStability Selection
sub-Phenotypes-ANY-ANY-ANY-methodSubsetting for Phenotype objects.
sub-TargetRelations-ANY-ANY-ANY-methodSubsetting for TargetRelations objects.
TargetRelations-classTargetRelations
target-relations-methodstarget.relations
trmatrix-methodsMethods for values of 'TargetRelations' objects
values-methodsvalues
cbg-ethz/gespeR documentation built on May 12, 2017, 12:04 a.m.