An R package to detect the maternal allele inheritance from next-generation sequencing data via the hierarchical Bayesian model.
First install JAGS. Then install the package
install.packages("remotes")
remotes::install_github("ccshao/maIHB")
Run hierarchical Bayesian model on builtin data F1.TypeA
byesRes.A <- BernHierModel(F1.TypeA[, -1], saveName = "Family1.TypeA")
Summarize the results with graphs
summaryRes.A <- smryMCMC(byesRes.A, saveName = "Family1.TypeA")
Inference of maternal allele inheritance via hierarchical Bayesian model in noninvasive prenatal diagnosis. bioRxiv doi: http://dx.doi.org/10.1101/051995
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