add_enzymes: Add enzymes catalyzing each reaction from the Generic...
In cds-group/MetabolitesGraphs: Extract metabolites-based graphs from metabolic model and gene expression data
Description
Usage
Arguments
Value
Examples
Description
This function add a new column with enzymes matching the correspondent reaction
Usage
1
add_enzymes(edges_list, rxn_gene)
Arguments
edges_list
dataframe with metabolites edges list
rx_gene
RXN-GENE dataframe extracted from Homo Sapiens generic GEM
Value
A dataframe with reactions, metabolites edges, and enzymes
Examples
1
2
3
4
## Not run:
data(rxn_gene)
edges_list_w_enzymes <- add_enzymes(edges_list, rxn_gene)
## End(Not run)
cds-group/MetabolitesGraphs documentation built on Dec. 19, 2021, 2:52 p.m.
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Description Usage Arguments Value Examples
Description
This function add a new column with enzymes matching the correspondent reaction
Usage
1 | add_enzymes(edges_list, rxn_gene)
|
Arguments
edges_list |
dataframe with metabolites edges list |
rx_gene |
RXN-GENE dataframe extracted from Homo Sapiens generic GEM |
Value
A dataframe with reactions, metabolites edges, and enzymes
Examples
1 2 3 4 | ## Not run:
data(rxn_gene)
edges_list_w_enzymes <- add_enzymes(edges_list, rxn_gene)
## End(Not run)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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