edges_list: Extract produced and consumed metabolites (met) for each...
In cds-group/MetabolitesGraphs: Extract metabolites-based graphs from metabolic model and gene expression data
Description
Usage
Arguments
Value
Examples
Description
This function creates the edges list necessary to build the metabolites graph.
It merges the metabolites produced and consumed by each reaction into a new
dataframe.
Usage
1
edges_list(infile)
Arguments
infile
stoichiometric matrix
Value
A dataframe with metabolites edges list
Examples
1
2
3
4
## Not run:
edges_list <- edges_list(stoich_mat)
## End(Not run)
cds-group/MetabolitesGraphs documentation built on Dec. 19, 2021, 2:52 p.m.
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Description Usage Arguments Value Examples
Description
This function creates the edges list necessary to build the metabolites graph. It merges the metabolites produced and consumed by each reaction into a new dataframe.
Usage
1 | edges_list(infile)
|
Arguments
infile |
stoichiometric matrix |
Value
A dataframe with metabolites edges list
Examples
1 2 3 4 | ## Not run:
edges_list <- edges_list(stoich_mat)
## End(Not run)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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