calculateDistance: Calculate the Genetic Distance Between Samples
In ceburris/sampleSniffer: Finds Closest Genetic Match Between Samples
Description
Calculates the percentage of SNP matches. The number of complete and matching
SNP loci is the numerator and the number of SNPs non-missing for both samples
is the denominator
Usage
1
calculateDistance(snp_matrix)
Arguments
snp_matrix
Matrix containing SNP calls
Matrix containing genetic distance between all samples
ceburris/sampleSniffer documentation built on May 14, 2019, 6:09 a.m.
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Description
Calculates the percentage of SNP matches. The number of complete and matching SNP loci is the numerator and the number of SNPs non-missing for both samples is the denominator
Usage
1 | calculateDistance(snp_matrix)
|
Arguments
snp_matrix |
Matrix containing SNP calls Matrix containing genetic distance between all samples |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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