Man pages for cells2numbers/migrationminer
Package for Creating and Analyzing Migration Profiles for Single Cell Tracking / Time Lapse Data
| angle | Angle of a track object. |
| assess | Assess track quality. |
| chemotaxis_index | Calculate the mean chemotaxis index of a track object. |
| directionality | Directionality of a track object. |
| directional_persistence | Calculate the mean directional_persistence of a track object. |
| displace | Add spatial displacement per frame for each track object |
| distance | Distance traveled and integrated distance traveled of a track... |
| forward_migration_index | Compute the forward migration index of a tracked object |
| lifetime | Lifetime of a track object. |
| mean_position | Get mean position |
| mean_squared_displacement | Mean squared displacement of a track object. |
| plot_windrose | Windrose style plot |
| sector_analysis | perform sector analysis and label each track according to its... |
| speed | Calculate speed for each track object in each frame |
| summarize_sectors | Summarize sector analysis per experiment |
| track | Compute track statistics |
| validate_tracks | Identify valid tracks. Valid tracks are defined as tracks... |
| valid_observation_time | calculate valid observation time as sum of the length of all... |
