valid_observation_time: calculate valid observation time as sum of the length of all...
In cells2numbers/migrationminer: Package for Creating and Analyzing Migration Profiles for Single Cell Tracking / Time Lapse Data
Description
Usage
Arguments
Value
Examples
Description
calculate valid observation time as sum of the length of all
valid tracks divided by the sum of the length of all tracks
Usage
1
valid_observation_time(tracks, min_path_length = 19)
Arguments
tracks
data frame with track objects
min_path_length
minimum length of a valid track
Value
valid_observation_time
Examples
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data <- tibble::tibble(
Metadata_timePoint = c(1:5),
Location_Center_X = c(1, 2, 3, 4, 5),
Location_Center_Y = c(1, 1, 1, 1, 1),
TrackObjects_Label = c(rep(1, 5))
)
data <- dplyr::group_by_(data, "TrackObjects_Label")
tracks <- migrationminer::track(data, "TrackObjects_Label")
min_path_length <- 5
vot <- migrationminer::valid_observation_time(tracks, min_path_length)
cells2numbers/migrationminer documentation built on May 28, 2019, 7:12 a.m.
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Description Usage Arguments Value Examples
Description
calculate valid observation time as sum of the length of all valid tracks divided by the sum of the length of all tracks
Usage
1 | valid_observation_time(tracks, min_path_length = 19)
|
Arguments
tracks |
data frame with track objects |
min_path_length |
minimum length of a valid track |
Value
valid_observation_time
Examples
1 2 3 4 5 6 7 8 9 10 | data <- tibble::tibble(
Metadata_timePoint = c(1:5),
Location_Center_X = c(1, 2, 3, 4, 5),
Location_Center_Y = c(1, 1, 1, 1, 1),
TrackObjects_Label = c(rep(1, 5))
)
data <- dplyr::group_by_(data, "TrackObjects_Label")
tracks <- migrationminer::track(data, "TrackObjects_Label")
min_path_length <- 5
vot <- migrationminer::valid_observation_time(tracks, min_path_length)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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