In cgplab/PAMESdata: Precomputed lists of informative CpG sites and islands for PAMES package

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PAMESdata

PAMESdata provides a set of CpG sites and CpG islands generated with our R package PAMES exploiting public data from TCGA. The following cancer types have been analyzed:

• BLCA
• BRCA
• COAD
• ESCA
• HNSC
• KIRC
• KIRP
• LIHC
• LUAD
• LUSC
• PAAD
• PRAD
• THCA
• UCEC

Installation

You can install PAMESdata from github with:

# install.packages("devtools")
devtools::install_github("cgplab/PAMESdata")

cgplab/PAMESdata documentation built on Feb. 2, 2021, 8:10 p.m.