find_outliers: Filter out oulier patients

Description Usage Arguments Value Author(s)

View source: R/data_utils_functions.R

Description

Identify feature outliers based oin IQR and exclude patients having a number of feature outliers greater than or equal to a predifined thereshold. This function is usefult to exclude heterogeneous patients and make the dataset more homogenous.

Usage

1
find_outliers(rdr = NULL, fraction_outliers = NULL)

Arguments

rdr

A RadAR object (class SummarizedExperiment)

fraction_outliers

(numeric) Minimum fraction of feature outliers to exclude a patient.

Value

An updated, eventually reduced, rdr (a RadAR object)

Author(s)

Matteo Benelli (matteo.benelli@uslcentro.toscana.it)


cgplab/RadAR documentation built on Nov. 10, 2021, 1:32 a.m.