indel_motif_scores: Compute the motif scores given a motif library and a list of...
In chandlerzuo/atIndel: Affinity test for identifying regularity Indels
indel_motif_scores R Documentation
Compute the motif scores given a motif library and a list of indels.
Description
Compute the motif scores given a motif library and a list of
Usage
indel_motif_scores(motif_lib, indel_info, num_cores = 1)
Arguments
motif_lib
A list of the position weight matrices for the motifs.
indel_info
A list object. Each element corresponds to an indel.
See indel_info for details and an example.
num_cores
An integer for the number of parallel processes used for
parallel computation.
Details
TODO.
Value
A list object of position weight matrices.
Author(s)
Qinyi Zhou qinyi.zhou@utdallas.edu,
Chandler Zuo chandler.c.zuo@gmail.com,
Sunyoung Shin sunyoung.shin@utdallas.edu
Examples
data(example)
indel_motif_scores(motif_lib, indel_info, num_cores=1)
chandlerzuo/atIndel documentation built on Jan. 20, 2024, 4:10 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
| indel_motif_scores | R Documentation |
Compute the motif scores given a motif library and a list of indels.
Description
Compute the motif scores given a motif library and a list of
Usage
indel_motif_scores(motif_lib, indel_info, num_cores = 1)
Arguments
motif_lib |
A list of the position weight matrices for the motifs. |
indel_info |
A list object. Each element corresponds to an indel. See indel_info for details and an example. |
num_cores |
An integer for the number of parallel processes used for parallel computation. |
Details
TODO.
Value
A list object of position weight matrices.
Author(s)
Qinyi Zhou qinyi.zhou@utdallas.edu, Chandler Zuo chandler.c.zuo@gmail.com, Sunyoung Shin sunyoung.shin@utdallas.edu
Examples
data(example)
indel_motif_scores(motif_lib, indel_info, num_cores=1)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.