FindAllNearestNeighbour: FindAllNearestNeighbour: apply 'FindNearestNeighbour' to...
In chansigit/scFly: Mapping cells with single-cell transcriptome data
Description
Usage
Arguments
Value
Description
FindAllNearestNeighbour: apply 'FindNearestNeighbour' to every rows of query
Usage
1
2
FindAllNearestNeighbour(query, reference, radius = 2, topN = 5,
ncores = 1)
Arguments
query
an element-by-feature query matrix
reference
an element-by-feature reference matrix
radius
radius for short-encoding threshold
topN
number of nearest neighbours to return
ncores
number of cores used in parallelization (currently not supported :(, sorry )
Value
Searching results, a dataframe including the row indices of found elements and distances
chansigit/scFly documentation built on Nov. 10, 2020, 12:33 a.m.
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Description Usage Arguments Value
Description
FindAllNearestNeighbour: apply 'FindNearestNeighbour' to every rows of query
Usage
1 2 | FindAllNearestNeighbour(query, reference, radius = 2, topN = 5,
ncores = 1)
|
Arguments
query |
an element-by-feature query matrix |
reference |
an element-by-feature reference matrix |
radius |
radius for short-encoding threshold |
topN |
number of nearest neighbours to return |
ncores |
number of cores used in parallelization (currently not supported :(, sorry ) |
Value
Searching results, a dataframe including the row indices of found elements and distances
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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