BuildEmbeddedObject: BuildEmbeddedObject

In chansigit/scFly: Mapping cells with single-cell transcriptome data

Description

BuildEmbeddedObject

Usage

BuildEmbeddedObject(data, hash.length, nProj, sampling.rate,
  do.center = FALSE, seed = 19940929, old.code = FALSE)

Arguments

data	an input matrix, each row is a data entry
hash.length	the length of an input vector after one random projection, the embedding size will be hash.length*nProj
nProj	the number of random projections
sampling.rate	the fraction of input vector used to calculate one activation
do.center	set this to TRUE if you hope to zero-centralize the data
seed	a seed for generating random vectors in LSH

Value

a list of embedding results '@long' stores the long hash, '@short' stores the short hash

chansigit/scFly documentation built on Nov. 10, 2020, 12:33 a.m.