crush: Crush cell line id format

In chapmandu2/biotidyr: Tidy functions for MultiAssayExperiment and PharmacoGX objects

Description

Helper function to remove punctuation and whitespace from cell line id's. This helps convert id's between datasets.

Usage

crush(x, upper_case = FALSE)

Arguments

x	character vector of ids
upper_case	boolean - return in upper case or not. Default FALSE

Value

character vector of crushed ids

Examples

data("CCLEsmall", package='PharmacoGx')
PharmacoGx::cellNames(CCLEsmall)[1:20]
crush(PharmacoGx::cellNames(CCLEsmall)[1:20])

chapmandu2/biotidyr documentation built on May 13, 2019, 3:29 p.m.