Rt-methods: Method Fixed window size scan for one window size

In christpa/DMRScan: Detection of Differentially Methylated Regions

Method Fixed window size scan for one window size

Description

Method Fixed window size scan for one window size

Usage

oneWindowSizeScanner(region, windowThreshold, windowSize)

## S4 method for signature 'GRangesList'
oneWindowSizeScanner(region, windowThreshold,
  windowSize)

## S4 method for signature 'GRanges'
oneWindowSizeScanner(region, windowThreshold,
  windowSize)

Arguments

region	Object of type GRanges
windowThreshold	Vector of window thresholds
windowSize	Vector of window sizes to be tested on regions

Value

A list of the windows that are significant

Examples

## Not run

christpa/DMRScan documentation built on Nov. 16, 2024, 9:36 a.m.