St-methods: Method Fixed window size scan for a sequence of window sizes

In christpa/DMRScan: Detection of Differentially Methylated Regions

Method Fixed window size scan for a sequence of window sizes

Description

Method Fixed window size scan for a sequence of window sizes

Usage

manyWindowSizeScanner(region, windowThreshold, windowSize)

## S4 method for signature 'GRangesList'
manyWindowSizeScanner(region, windowThreshold,
  windowSize)

## S4 method for signature 'GRanges'
manyWindowSizeScanner(region, windowThreshold,
  windowSize)

Arguments

region	Object of type GRanges
windowThreshold	Vector of window thresholds
windowSize	Vector of window sizes to be tested on regions

Value

A list of the windows that are significant

Examples

## Not run

christpa/DMRScan documentation built on Feb. 2, 2024, 5:12 a.m.