Man pages for churchill-lab/scRATE
A Bayesian model selection approach to test zero inflation from scRNA-seq data
| collate_results | Collate the results from "run_model_comparison" into a single... |
| compare_count_models | Compare models in respect to ELPD_loo |
| create_loom | Create a basic loom file from a tsv file that contains UMI... |
| fit_count_models | Fit a gene with regression models |
| get_model_fit | Fit regression models for many genes and save the fitting... |
| get_model_params | An internal function to re-organize stan_fit parameters |
| perform_model_selection | Select model for every genes and save it to the original loom... |
| prepare_job_array | Divide the entire data into many chunks to... |
| run_model_comparison | Fit regression models for many genes |
| scRATE-package | The 'scRATE' package. |
| select_model | Bayesian model selection for scRNA-seq count data |
| submit_jobs | Divide the entire data into many chunks submit... |
| version | Bayesian model selection for scRNA-seq count data |
