perform_model_selection: Select model for every genes and save it to the original loom...

In churchill-lab/scRATE: A Bayesian model selection approach to test zero inflation from scRNA-seq data

Description

Select model for every genes and save it to the original loom file

Usage

perform_model_selection(fit_list, margin = 2, loomfile = NULL,
  attr_name = NULL, verbose = FALSE)

Arguments

fit_list	A list of model fitting results
margin	A multiplier for standard deviation (SD) in leave-one-out ELPD for calling models
loomfile	A expression quantity file (loom format)
attr_name	Name of the row attribute in loomfile for storing best model calls
verbose	Whether to print out overall model calls

Value

modelcall Models called for genes. Stored in the input loomfile if provided.

churchill-lab/scRATE documentation built on Aug. 12, 2020, 2:52 p.m.