eltonSDM: Pull posteriors from gRain results

In cjcarlson/elton: Eltonian Species Distribution Models Using Food Webs

Description

Pull out a clean vector of posterior probabilities (useful for raster work)

Usage

eltonSDM(stack.prior, M, offset = NA, model.sel = "ticks")

Arguments

value

text

Examples

r1 <- raster(matrix(nrow=5,ncol=5,c(rnorm(25,0.7,0.05))))
r2 <- raster(matrix(nrow=5,ncol=5,c(rnorm(25,0.7,0.05))))
r3 <- raster(matrix(nrow=5,ncol=5,c(rnorm(25,0.7,0.05))))
r4 <- raster(matrix(nrow=5,ncol=5,c(rnorm(25,0.7,0.05))))
r5 <- raster(matrix(nrow=5,ncol=5,c(rnorm(25,0.7,0.05))))
r6 <- raster(matrix(nrow=5,ncol=5,c(rnorm(25,0.7,0.05))))
r7 <- raster(matrix(nrow=5,ncol=5,c(rep(0.5,25))))
M2 <- matrix(c(rep(0,42),1,1,1,1,1,5,0), nrow=7, ncol=7)
rstack <- stack(r1,r2,r3,r4,r5,r6,r7)
posteriors <- eltonSDM(rstack,M2)

cjcarlson/elton documentation built on May 7, 2019, 5 a.m.