setBaseDirectory: Set Base Directory for neonMicrobe Workspace
In claraqin/neonMicrobe: Downloading, Pre-processing, and Assembling NEON Soil Microbe Marker Gene Sequence Data
setBaseDirectory R Documentation
Set Base Directory for neonMicrobe Workspace
Description
Sets the specified directory as the workspace for the neonMicrobe pipeline. This base directory persists until the end of the R session. If data directories have not yet been generated within the base directory, use makeDataDirectories to do so.
Usage
setBaseDirectory(dir = getwd())
Arguments
dir
Directory to use as the base directory. Defaults to the working directory.
Value
No value is returned.
See Also
makeDataDirectories
Examples
setBaseDirectory() # sets current working directory as base directory
setBaseDirectory(dirname(getwd())) # sets parent directory as base directory
claraqin/neonMicrobe documentation built on April 11, 2024, 11:47 a.m.
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| setBaseDirectory | R Documentation |
Set Base Directory for neonMicrobe Workspace
Description
Sets the specified directory as the workspace for the neonMicrobe pipeline. This base directory persists until the end of the R session. If data directories have not yet been generated within the base directory, use makeDataDirectories to do so.
Usage
setBaseDirectory(dir = getwd())
Arguments
dir |
Directory to use as the base directory. Defaults to the working directory. |
Value
No value is returned.
See Also
makeDataDirectories
Examples
setBaseDirectory() # sets current working directory as base directory
setBaseDirectory(dirname(getwd())) # sets parent directory as base directory
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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