copy_manifest_files: Copy files from manifest into the codecheck folder and...

In codecheckers/codecheck: Helper Functions for CODECHECK Project

Copy files from manifest into the codecheck folder and summarise.

Description

Copy manifest files into the root/codecheck/outputs folder; return manifest.

Usage

copy_manifest_files(
  root,
  metadata,
  dest_dir,
  keep_full_path = FALSE,
  overwrite = FALSE
)

Arguments

root	- Path to the root folder of the project.
metadata	- the codecheck metadata list.
dest_dir	- folder where outputs are to be copied to (codecheck/outputs)
keep_full_path	- TRUE to keep relative pathname of figures.
overwrite	- TRUE to overwrite the output files even if they already exist

Details

The metadata should specify the manifest – the files to copy into the codecheck/oututs folder. Each of the files in the manifest is copied into the destination directory and then the manifest is returned as a dataframe. If KEEP_FULL_PATH is TRUE, we keep the full path for the output files. This is useful when there are two output files with the same name in different folders, e.g. expt1/out.pdf and expt2/out.pdf

Value

A dataframe containing one row per manifest file.

Author(s)

Stephen Eglen

codecheckers/codecheck documentation built on Dec. 6, 2024, 7:38 p.m.