The main class used by Monocle3 to hold single-cell expression data. cell_data_set extends the Bioconductor SingleCellExperiment class.
This class is initialized from a matrix of expression values along with cell and feature metadata.
SimpleList, auxiliary information from preprocessing.
SimpleList, auxiliary information from reduced dimension.
SimpleList, auxiliary information from principal graph construction
SimpleList of igraph objects containing principal graphs for different dimensionality reduction.
SimpleList of cluster information for different dimensionality reduction.
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