gfrn_geneList: Pathway Signature Gene Lists

In compbiomed/ASSIGN: Adaptive Signature Selection and InteGratioN (ASSIGN)

Pathway Signature Gene Lists

Description

Pathway signature gene lists have been optimized based on correlations of pathway activity data and protein data. The gene lists can be used to avoid the bayesian gene selection step of ASSIGN, which will decrease the amount of time it takes to run ASSIGN.

Format

List of gene lists for akt, bad, egfr, her2, igf1r, krasgv, krasqh, and raf

Source

Bild et al.

compbiomed/ASSIGN documentation built on June 28, 2023, 4 a.m.