Files in compomics/search-all-assess-subset
An implementation of the Search All, Asses Subset strategy for FDR estimation shotgun proteomics.
.Rbuildignore
DESCRIPTION
NAMESPACE
NEWS.md
R/app.R
R/functions.R
README.md
_pkgdown.yaml
docs/articles/bib.bib
docs/articles/index.html
docs/articles/saas.html
docs/articles/saas_files/figure-html/unnamed-chunk-3-1.png
docs/articles/saas_files/figure-html/unnamed-chunk-8-1.png
docs/articles/saas_files/figure-html/unnamed-chunk-9-1.png
docs/authors.html
docs/index.html
docs/jquery.sticky-kit.min.js
docs/link.svg
docs/news/index.html
docs/pkgdown.css
docs/pkgdown.js
docs/reference/PPplot-2.png
docs/reference/PPplot.html
docs/reference/calculate_fdr.html
docs/reference/check_input.html
docs/reference/dpi0-4.png
docs/reference/dpi0-6.png
docs/reference/dpi0-8.png
docs/reference/dpi0.html
docs/reference/id_is_present.html
docs/reference/index.html
docs/reference/parse_msgf_mzid.html
docs/reference/pi0plot-2.png
docs/reference/pi0plot.html
docs/reference/plot_diag-11.png
docs/reference/plot_diag-3.png
docs/reference/plot_diag-5.png
docs/reference/plot_diag-7.png
docs/reference/plot_diag-9.png
docs/reference/plot_diag.html
docs/reference/plot_theo_dist.html
docs/reference/preprocess.html
docs/reference/rpi0-2.png
docs/reference/rpi0.html
docs/reference/saas_gui.html
docs/reference/sample_dataset-10.png
docs/reference/sample_dataset-5.png
docs/reference/sample_dataset.html
docs/reference/server.html
docs/reference/simulate_subset.html
docs/reference/ui.html
inst/NEWS
inst/doc/saas.R
inst/doc/saas.Rmd
inst/doc/saas.html
inst/extdata/cytoplasm.csv
inst/extdata/extdata.zip
man/PPplot.Rd
man/calculate_fdr.Rd
man/check_input.Rd
man/dpi0.Rd
man/id_is_present.Rd
man/parse_msgf_mzid.Rd
man/pi0plot.Rd
man/plot_diag.Rd
man/plot_theo_dist.Rd
man/preprocess.Rd
man/rpi0.Rd
man/saas_gui.Rd
man/sample_dataset.Rd
man/server.Rd
man/simulate_subset.Rd
man/ui.Rd
vignettes/bib.bib
vignettes/saas.Rmd
vignettes/saas.html
vignettes/saas_files/figure-html/unnamed-chunk-3-1.png
vignettes/saas_files/figure-html/unnamed-chunk-8-1.png
vignettes/saas_files/figure-html/unnamed-chunk-9-1.png
