Files in compomics/search-all-assess-subset

An implementation of the Search All, Asses Subset strategy for FDR estimation shotgun proteomics.

.Rbuildignore

DESCRIPTION

NAMESPACE

NEWS.md R/app.R R/functions.R README.md

_pkgdown.yaml

docs/articles/bib.bib

docs/articles/index.html

docs/articles/saas.html

docs/articles/saas_files/figure-html/unnamed-chunk-3-1.png

docs/articles/saas_files/figure-html/unnamed-chunk-8-1.png

docs/articles/saas_files/figure-html/unnamed-chunk-9-1.png

docs/authors.html

docs/index.html

docs/jquery.sticky-kit.min.js

docs/link.svg

docs/news/index.html

docs/pkgdown.css

docs/pkgdown.js

docs/reference/PPplot-2.png

docs/reference/PPplot.html

docs/reference/calculate_fdr.html

docs/reference/check_input.html

docs/reference/dpi0-4.png

docs/reference/dpi0-6.png

docs/reference/dpi0-8.png

docs/reference/dpi0.html

docs/reference/id_is_present.html

docs/reference/index.html

docs/reference/parse_msgf_mzid.html

docs/reference/pi0plot-2.png

docs/reference/pi0plot.html

docs/reference/plot_diag-11.png

docs/reference/plot_diag-3.png

docs/reference/plot_diag-5.png

docs/reference/plot_diag-7.png

docs/reference/plot_diag-9.png

docs/reference/plot_diag.html

docs/reference/plot_theo_dist.html

docs/reference/preprocess.html

docs/reference/rpi0-2.png

docs/reference/rpi0.html

docs/reference/saas_gui.html

docs/reference/sample_dataset-10.png

docs/reference/sample_dataset-5.png

docs/reference/sample_dataset.html

docs/reference/server.html

docs/reference/simulate_subset.html

docs/reference/ui.html

inst/NEWS

inst/doc/saas.R inst/doc/saas.Rmd

inst/doc/saas.html

inst/extdata/cytoplasm.csv

inst/extdata/extdata.zip

man/PPplot.Rd man/calculate_fdr.Rd man/check_input.Rd man/dpi0.Rd man/id_is_present.Rd man/parse_msgf_mzid.Rd man/pi0plot.Rd man/plot_diag.Rd man/plot_theo_dist.Rd man/preprocess.Rd man/rpi0.Rd man/saas_gui.Rd man/sample_dataset.Rd man/server.Rd man/simulate_subset.Rd man/ui.Rd

vignettes/bib.bib

vignettes/saas.Rmd

vignettes/saas.html

vignettes/saas_files/figure-html/unnamed-chunk-3-1.png

vignettes/saas_files/figure-html/unnamed-chunk-8-1.png

vignettes/saas_files/figure-html/unnamed-chunk-9-1.png

compomics/search-all-assess-subset documentation built on May 13, 2019, 9:55 p.m.