generateData: generateData

In cont-limno/speCluster: Spectral Clustering in R

Description

Generate the data for clustering

Usage

generateData(type, islands, latLong, NB18876, islandsIn = FALSE,
  states = vector(), conFactor = 1)

Arguments

type	three options "dataTerr", "dataFW", and "dataTerrFW"
islands	vector of islands?
latLong	coordinates
NB18876	neighbor data.frame?
islandsIn	if TRUE the islands will be included
states	a vector of states names that have to be included
conFactor	contiguity constraint factor

Value

a list with three elements: data, conMatrix, and latLong

Examples

## Not run: 
dataTerr     <- read.csv("data-raw/terrData.csv", header = TRUE)
dataFW       <- read.csv("data-raw/freshData.csv", header = TRUE)
i <- which(colnames(dataFW) == "hu12_states")
dataTerrFW   <- merge(dataTerr, dataFW[-i], by.x = "zoneid", by.y = "zoneid")
islands      <- read.csv("data-raw/islandIdx.csv", header = TRUE)
latLong18876 <- read.csv("data-raw/latLong18876.csv", header = TRUE)
NB18876      <- read.csv("data-raw/NB_18876.csv", header = TRUE)

input <- generateData(type = dataTerrFW, islands = islands,
latLong = latLong18876, NB18876, islandsIn = FALSE, states = c("MO"),
conFactor = 1)

## End(Not run)

cont-limno/speCluster documentation built on Aug. 10, 2021, 1:06 p.m.