limitToXkb: limitToXkb truncates a set of genomic intervals at a...
In coregenomics/groHMM: GRO-seq Analysis Pipeline
Description
Usage
Arguments
Value
Author(s)
Examples
Description
limitToXkb truncates a set of genomic intervals at a constant, maximum size.
Usage
1
limitToXkb(features, offset = 1000, size = 13000)
Arguments
features
A GRanges object representing a set of genomic coordinates.
offset
Starts the interval from this position relative to the start
of each genomic features.
size
Specifies the size of the window.
Value
Returns GRanges object with new genomic coordinates.
Author(s)
Minho Chae and Charles G. Danko
Examples
1
2
3
library(GenomicRanges)
tx <- GRanges("chr7", IRanges(1000, 30000), strand="+")
newTX <- limitToXkb(tx)
coregenomics/groHMM documentation built on May 7, 2019, 7:57 a.m.
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Description Usage Arguments Value Author(s) Examples
Description
limitToXkb truncates a set of genomic intervals at a constant, maximum size.
Usage
1 | limitToXkb(features, offset = 1000, size = 13000)
|
Arguments
features |
A GRanges object representing a set of genomic coordinates. |
offset |
Starts the interval from this position relative to the start of each genomic features. |
size |
Specifies the size of the window. |
Value
Returns GRanges object with new genomic coordinates.
Author(s)
Minho Chae and Charles G. Danko
Examples
1 2 3 | library(GenomicRanges)
tx <- GRanges("chr7", IRanges(1000, 30000), strand="+")
newTX <- limitToXkb(tx)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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