R/data.R

In cosmonet-package/COSMONET: Screening-network Cox methods for survival analysis

#' @exportPattern "."
#' @name Repository tissue-specific genes
#' @title Repository tissue-specific genes
#'
#' @description A repository of prediction scores or posterior probabilities associated to each gene. The higher the probability the stronger the functional relation between the gene and the tissue cancer.
#'
#' @docType data
#'
#' @usage data(repositoryDisease)
#'
#' @format Objects of class `"data.frame"`.
#'
#' @keywords datasets
#'
#' @source https://hb.flatironinstitute.org
#'
#' @examples
#' data(repositoryDisease)
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#' @name KEGG repository
#' @title KEGG repository
#'
#' @description A data frame contains pathway maps representing the a-priori biological knowledge including molecular interaction, reaction and networks relations (KEGG, PPI, etc).
#'
#' @docType data
#'
#' @usage data(KEGGrepository)
#'
#' @format Objects of class `"data.frame"`.
#'
#' @keywords datasets
#'
#' @source https://www.genome.jp/kegg/pathway.html
#'
#' @examples
#' data(KEGGrepository)
NULL