API for cozygene/CellTypeSpecificMethylationAnalysis
Evaluation of Cell Type Specific Methylation Analysis
| Global functions | |
|---|---|
| blood.ref.333cpgs | Man page |
| calculate_metrics | Source code |
| celldmc | Man page Source code |
| compare_cell_fraction_estimates | Man page Source code |
| compare_runtimes | Man page Source code |
| compare_vars_mle | Man page Source code |
| epic_qc | Man page Source code |
| evaluate_celldmc_results | Source code |
| evaluate_tca_results | Source code |
| extract_pvals | Source code |
| fit_beta | Source code |
| get_hannum | Source code |
| get_reference_data | Source code |
| get_scenario_effect_pairs | Source code |
| init_summary_lists | Source code |
| koestler | Man page |
| parametric.run_simulation | Source code |
| parametric.select_true_sites | Source code |
| parametric.simulate_Z | Source code |
| parametric.simulate_bulk | Source code |
| parametric_simulations | Man page Source code |
| plot_consistency_analsyis | Source code |
| plot_cors | Man page Source code |
| plot_power_simulation | Source code |
| plot_qq | Source code |
| plot_results | Man page Source code |
| plot_runtimes | Man page Source code |
| plot_smoking_analysis | Source code |
| plot_smoking_heatmap | Source code |
| prep_bbc_data | Man page Source code |
| prep_data | Source code |
| prep_parametric_simulation_data | Source code |
| prep_smoking_data | Man page Source code |
| process_meth_data | Source code |
| refit_w_comparison | Man page Source code |
| run_celldmc.simulation | Source code |
| run_ewas | Source code |
| run_smoking_analysis | Man page Source code |
| run_tca.simulation | Source code |
| runtime_comparison | Man page Source code |
| smoking_analysis | Man page Source code |
| summarize_res | Man page Source code |
| tca.gmm | Man page Source code |
| tca.gmm.reg | Man page Source code |
| tca.mle | Man page Source code |
| update_metrics_summaries | Source code |
| var_mle_gmm_comparison | Man page Source code |
