koestler: Koestler Methylation Dataset
In cozygene/CellTypeSpecificMethylationAnalysis: Evaluation of Cell Type Specific Methylation Analysis
Description
Usage
Format
References
Examples
Description
Includes over 400k methylation sites from blood for 18
individuals with FACS-based cell fractions for major
blood cell types available.
Usage
1
Format
An object of class '"list"'. Slot X contains
methylation values in matrix format. Slots
C1 and C2 are NULL as no
covariates were used in these analyses.
Slot W.facs contains FACS-based cell fractions
in a data.frame format.
References
Koestler DC, Jones MJ, Usset J, Christensen BC, Butler RA, Kobor MS, Wiencke JK, Kelsey KT: Improving cell mixture deconvolution by identifying optimal DNA methylation libraries (IDOL). BMC Bioinformatics 2016, 17:120.
Examples
1
2
cozygene/CellTypeSpecificMethylationAnalysis documentation built on Jan. 28, 2022, 11:20 a.m.
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Description Usage Format References Examples
Description
Includes over 400k methylation sites from blood for 18 individuals with FACS-based cell fractions for major blood cell types available.
Usage
1 |
Format
An object of class '"list"'. Slot X contains
methylation values in matrix format. Slots
C1 and C2 are NULL as no
covariates were used in these analyses.
Slot W.facs contains FACS-based cell fractions
in a data.frame format.
References
Koestler DC, Jones MJ, Usset J, Christensen BC, Butler RA, Kobor MS, Wiencke JK, Kelsey KT: Improving cell mixture deconvolution by identifying optimal DNA methylation libraries (IDOL). BMC Bioinformatics 2016, 17:120.
Examples
1 2 |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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