prep_bbc_data: Downloads and processes raw BBC methylation data
In cozygene/CellTypeSpecificMethylationAnalysis: Evaluation of Cell Type Specific Methylation Analysis
Description
Usage
Arguments
Value
View source: R/refit_w_comparison.r
Description
Downloads and processes raw BBC methylation data
Usage
1
prep_bbc_data(data_dir, bbc_pheno_path, bbc_facs_path)
Arguments
data_dir
Directory to save bbc.RData
bbc_pheno_path
Path to PhenoTypesBBC.Rd (provided by Jing et al.) which contains
covariates for the BBC dataset
bbc_facs_path
Path to facsBBC.Rd (provided by Jing et al.) which contains
FACS-based cell fractions for the BBC dataset
Value
The bbc object for analysis. Also saves an RData file to specified directory
cozygene/CellTypeSpecificMethylationAnalysis documentation built on Jan. 28, 2022, 11:20 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Value
View source: R/refit_w_comparison.r
Description
Downloads and processes raw BBC methylation data
Usage
1 | prep_bbc_data(data_dir, bbc_pheno_path, bbc_facs_path)
|
Arguments
data_dir |
Directory to save bbc.RData |
bbc_pheno_path |
Path to PhenoTypesBBC.Rd (provided by Jing et al.) which contains covariates for the BBC dataset |
bbc_facs_path |
Path to facsBBC.Rd (provided by Jing et al.) which contains FACS-based cell fractions for the BBC dataset |
Value
The bbc object for analysis. Also saves an RData file to specified directory
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.