get_rpkm: Calculate RPKM (Reads per kilobase per million).
In cparsania/parcutils: Utility Functions To Deal Day To Day Bioinformatics Tasks.
View source: R/general_bioinfo.R
get_rpkm R Documentation
Calculate RPKM (Reads per kilobase per million).
Description
given the raw counts and length of genomic features this function returns normalized counts as reads per kilo-base per million (RPKM).
Usage
get_rpkm(counts, lengths)
Arguments
counts
a numeric vector giving counts of reads aligned against genomic intervals.
lengths
a numeric vector giving length of genomic intervals.
Value
a numeric vector giving RPKM
cparsania/parcutils documentation built on Oct. 27, 2024, 4:55 a.m.
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View source: R/general_bioinfo.R
| get_rpkm | R Documentation |
Calculate RPKM (Reads per kilobase per million).
Description
given the raw counts and length of genomic features this function returns normalized counts as reads per kilo-base per million (RPKM).
Usage
get_rpkm(counts, lengths)
Arguments
counts |
a numeric vector giving counts of reads aligned against genomic intervals. |
lengths |
a numeric vector giving length of genomic intervals. |
Value
a numeric vector giving RPKM
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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