get_tpm: Calculate TPM (Tags Per Million).
In cparsania/parcutils: Utility Functions To Deal Day To Day Bioinformatics Tasks.
View source: R/general_bioinfo.R
get_tpm R Documentation
Calculate TPM (Tags Per Million).
Description
given the raw counts and length of genomic features this function returns normalized counts as tags per million (TPM).
Usage
get_tpm(counts, lengths)
Arguments
counts
a numeric vector giving counts of reads aligned against genomic intervals.
lengths
a numeric vector giving length of genomic intervals.
Value
a numeric vector giving TPM
cparsania/parcutils documentation built on Oct. 27, 2024, 4:55 a.m.
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View source: R/general_bioinfo.R
| get_tpm | R Documentation |
Calculate TPM (Tags Per Million).
Description
given the raw counts and length of genomic features this function returns normalized counts as tags per million (TPM).
Usage
get_tpm(counts, lengths)
Arguments
counts |
a numeric vector giving counts of reads aligned against genomic intervals. |
lengths |
a numeric vector giving length of genomic intervals. |
Value
a numeric vector giving TPM
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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