ctlab/gatom: Finding an Active Metabolic Module in Atom Transition Network
This package implements a metabolic network analysis pipeline to identify an active metabolic module based on high throughput data. The pipeline takes as input transcriptional and/or metabolic data and finds a metabolic subnetwork (module) most regulated between the two conditions of interest. The package further provides functions for module post-processing, annotation and visualization.
Getting started
Browse package contents
Package details |
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| Bioconductor views | DifferentialExpression GeneExpression Network Pathways |
| Maintainer | |
| License | MIT + file LICENCE |
| Version | 1.3.0 |
| URL | https://github.com/ctlab/gatom/ |
| Package repository | View on GitHub |
| Installation |
Install the latest version of this package by entering the following in R:
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