addHighlyExpressedEdges: Add reactions without highly changing genes but with high...
In ctlab/gatom: Finding an Active Metabolic Module in Atom Transition Network
addHighlyExpressedEdges R Documentation
Add reactions without highly changing genes but with high average expression
Description
Add reactions without highly changing genes but with high average expression
Usage
addHighlyExpressedEdges(m, g, top = 3000)
Arguments
m
Metabolic module
g
Scored graph
top
Maximum rank value for the gene to be considered highly expressed
Value
module with added edges that correspond to high average expression
Examples
data(mEx)
data(gEx)
m <- addHighlyExpressedEdges(m = mEx, g = gEx)
ctlab/gatom documentation built on May 3, 2024, 3:44 p.m.
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| addHighlyExpressedEdges | R Documentation |
Add reactions without highly changing genes but with high average expression
Description
Add reactions without highly changing genes but with high average expression
Usage
addHighlyExpressedEdges(m, g, top = 3000)
Arguments
m |
Metabolic module |
g |
Scored graph |
top |
Maximum rank value for the gene to be considered highly expressed |
Value
module with added edges that correspond to high average expression
Examples
data(mEx)
data(gEx)
m <- addHighlyExpressedEdges(m = mEx, g = gEx)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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