addHighlyExpressedEdges: Add reactions without highly changing genes but with high...

View source: R/gatom.R

addHighlyExpressedEdgesR Documentation

Add reactions without highly changing genes but with high average expression

Description

Add reactions without highly changing genes but with high average expression

Usage

addHighlyExpressedEdges(m, g, top = 3000)

Arguments

m

Metabolic module

g

Scored graph

top

Maximum rank value for the gene to be considered highly expressed

Value

module with added edges that correspond to high average expression

Examples

data(mEx)
data(gEx)
m <- addHighlyExpressedEdges(m = mEx, g = gEx)


ctlab/gatom documentation built on May 3, 2024, 3:44 p.m.