Files in cuhklinlab/RA3
The R-based implementation of "A reference-guided approach for epigenetic characterization of single cells".
.Rbuildignore
.gitignore
DESCRIPTION
LICENSE
NAMESPACE
R/.DS_Store
R/Dataprep.R
R/RA3_EM.R
R/RA3_RefProj.R
R/RA3_TrajInf.R
R/RA3_clustering.R
R/RA3_motif.R
R/RA3_pcatsne.R
R/runRA3.R
RA3.Rproj
README.md
data/.DS_Store
data/donorBM0828_bulk_mat.rda
data/donorBM0828_label_mat.rda
data/donorBM0828_peak_vec.rda
data/donorBM0828_sc_mat.rda
data/forebrain_bulk_mat.rda
data/forebrain_label_mat.rda
data/forebrain_sc_mat.rda
doc/RA3.R
doc/RA3.Rmd
doc/RA3.html
doc/figs/A_RA3.png
doc/figs/A_bulk.png
doc/figs/A_pca.png
doc/figs/B_RA3.png
doc/figs/B_pca.png
doc/figs/heat_1.png
doc/figs/heat_2.png
doc/figs/traj.png
man/.DS_Store
man/Dataprep.Rd
man/RA3_EM.Rd
man/RA3_RefProj.Rd
man/RA3_TrajInf.Rd
man/RA3_clustering.Rd
man/RA3_motif.Rd
man/RA3_pcatsne.Rd
man/getClusterSpecificPvalue.Rd
man/getContrast.Rd
man/getSigmaPrior.Rd
man/getbetaMAP.Rd
man/getbetaMLE.Rd
man/getdesign.Rd
man/runRA3.Rd
vignettes/.DS_Store
vignettes/.gitignore
vignettes/RA3.Rmd
