API for currocam/HMMERutils
HMMERutils

Global functions
%>% Man page
add_AAStringSet_to_tbl Source code
add_physicochemical_properties_to_HMMER_tbl Man page Source code
add_sequences_to_hmmer_tbl Man page Source code
add_taxa_to_hmmer_tbl Man page Source code
annotate_with_NCBI_taxid Man page Source code
bind_and_unnest Source code
calculate_percentage_sequence_identity Source code
check_if_url Source code
check_seqs Source code
convert_input_seq Source code
create_download_url_for_hmmer Source code
delete_na_rows Source code
download_file Source code
extract_evalue_from_domains Source code
extract_from_hmmer Man page Source code
filter_hmmer Man page Source code
fix_evalue_column Source code
format_AAStringSet_into_hmmer_string Source code
get_api_search_url Source code
hmmer_evalues_cleveland_dot_plot Man page Source code
hmmscan_2abl Man page
pairwise_alignment_sequence_identity Man page Source code
pairwise_sequence_identity_heatmap Man page Source code
pairwise_sequence_identity_histogram Man page Source code
params_into_query_list Source code
parse_fasta_headers Man page Source code
parse_results_into_tbl Source code
phmmer_2abl Man page
post_query Source code
read_hmmer_from_json Man page Source code
search_hmmscan Man page Source code
search_hmmsearch Man page Source code
search_in_hmmer Source code
search_phmmer Man page Source code
currocam/HMMERutils documentation built on Feb. 15, 2023, 8:41 p.m.