combine_all_sample: Combine all samples from 7 studies that match the measured...

Description Usage Examples

Description

Combine all samples from 7 studies that match the measured metabolites

Usage

1
2
3
4
5
6
7
8
combine_all_sample(num_study = num_sutdy, study_name = study_name,
  standardize = "none", df1 = RC12, df2 = RC18, df3 = BC_tang,
  df4 = BC_terunuma, df5 = HCC, df6 = DLBCL, df7 = PaCa,
  df1_sampleinfo = RC12_sampleinfo, df2_sampleinfo = RC18_sampleinfo,
  df3_sampleinfo = BC_tang_sampleinfo,
  df4_sampleinfo = BC_terunuma_sampleinfo,
  df5_sampleinfo = HCC_sampleinfo, df6_sampleinfo = DLBCL_sampleinfo,
  df7_sampleinfo = PaCa_sampleinfo)

Examples

1
2
3
run function in our data
data_all_sample  <- combine_all_sample(
num_study=7, df1 = RC12, df2 = RC18, df3 = BC_tang, df4 = BC_terunuma, df5=HCC, df6 = DLBCL, df7 = PaCa,  df1_sampleinfo= RC12_sampleinfo, df2_sampleinfo = RC18_sampleinfo, df3_sampleinfo = BC_tang_sampleinfo, df4_sampleinfo = BC_terunuma_sampleinfo, df5_sampleinfo = HCC_sampleinfo, df6_sampleinfo = DLBCL_sampleinfo, df7_sampleinfo= PaCa_sampleinfo )

czang97/mpred documentation built on July 9, 2019, 2:38 p.m.