prepare_data: Prepare dataset

In czang97/mpred: Predict unmeasured metabolites

Description

This function allows you to read in supplement data–sample info and met info

Usage

prepare_data(df, df_sampleinfo, df_sample_name = "SAMPLE_NAME",
  type = "tumor")

Arguments

df	main dataframe that contain sample metabolite measures
df_sample_name	the variable name for sample name, vary for each dataset Default is sampleinfo.SAMPLE_NAME
type	tumor or normal Default to tumor
df_sample_info	sample information

Examples

data(RC12)
data(RC12_sampleinfo)
RC12_tumor <- prepare_data(df = RC12, df_sampleinfo = RC12_sampleinfo, df_sample_name = "SAMPLE_NAME", type = "tumor")

czang97/mpred documentation built on July 9, 2019, 2:38 p.m.