Man pages for cziegenhain/UMIcountR
tools for spike-in UMI analysis
| bc_correct | Error correct BC sequences with known list |
| extract_complex_spike_dat | Load and extract spUMIs from sequencing reads with complex... |
| extract_spike_dat | Load and extract spUMIs from sequencing reads with v1... |
| get_overrepresented_spikes | Find overrepresented spUMI sequences |
| plot_spike_distances | Plot minimal pairwise distances between spUMIs within / over... |
| return_corrected_umi | Return corrected UMI sequences |
| subsample_recompute | Subsample molecular spikes per cell and recompute hamming... |
| UMIcountR-package | UMIcountR: tools for spike-in UMI analysis |
