plotModHist: Plot histograms of the modification rates for all...

In daewon-gong/NanoPlotR: Nanopore Sequencing Based RNA Modification Detection Visualization

Description

Check format of xPore's output format for required modResults format.

Usage

plotModHist(modResults)

Arguments

modResults

RNA modification detection results in a data frame.

Value

Histograms of all modification rates in 1 panel.

Author(s)

Dae-won Gong, [e-mail]

References

1. Frank E Harrell Jr (2021). Hsmisc: Harrell Miscellaneous. R package version 4.6.0. https://CRAN.R-project.org/package=Hmisc

2. Pratanwanich, P. N., Yao, F., Chen, Y., Koh, C. W. Q., Wan, Y. K., Hendra, C., Poon, P., Goh, Y. T., Yap, P. M. L., Chooi, J. Y., Chng, W. J., Ng, S. B., Thiery, A., Goh, W. S. S., & Göke, J. (2021). Identification of differential RNA modifications from nanopore direct RNA sequencing with xPore. Nature Biotechnology,39(11), 1394–1402. https://doi.org/10.1038/s41587-021-00949-w

Examples

plotModHist(RnaModificationResults)

daewon-gong/NanoPlotR documentation built on Dec. 19, 2021, 8:02 p.m.