check_coverage: Check Coverage

In danagibbon/MultifacitedChoice:

Description

Check the percentage of genotyped loci with coverage.
Returns list of samples under specified percentage.

Usage

check_coverage(DB, females, males, GT = 40)

Arguments

DB	RSQLite database generated by make_database
females	Sample IDs of the female to compare to a male. The Sample ID must match the ones found in the DB.
males	Sample IDs of the males to compare to a female. The Sample ID must match the ones found in the DB.
GT	percent of genotypes you want to

Value

dataframe or message

Examples

## Not run: 
check_coverage(DBs, females, males, 40)

## End(Not run)

danagibbon/MultifacitedChoice documentation built on Dec. 31, 2020, 11:10 p.m.