rank_all_mates: Rank all mates

In danagibbon/MultifacitedChoice:

Description

This function takes the output of get_all_rankings and ranks all possible matings so that the sum of the score of all mate pairings is optimized.
This function uses a permutation without replacement and makes a matrix of the size of all possibilities. It is not recommended to use more than 10x10 samples.

Usage

rank_all_mates(females, males, ranked_list, output_head = 5)

Arguments

females	Vector of sample IDs of the females to compare to the males. The Sample IDs must match the ones found in the DB.
males	Vector of sample IDs of the males to compare to the females. The Sample IDs must match the ones found in the DB.
ranked_list	List output from get_all_rankings
Output_head	Integer value for the top number of mating pairings. Default: top 5 mating pairings

Value

Dataframe

Examples

## Not run: 
all_mates <- rank_all_mates(DB = DBs, female = females,
                              males = males, type = "all_alleles",
                              bonus=NULL, weighted_alleles=NULL)

## End(Not run)

danagibbon/MultifacitedChoice documentation built on Dec. 31, 2020, 11:10 p.m.