Man pages for daniel1noble/orchaRd
Orchard Plots and Prediction Intervals for Meta-analysis and Meta-regression
| bubble_plot | bubble_plot |
| caterpillars | caterpillars |
| cvh1_ml | cvh1_ml |
| cvh2_ml | cvh2_ml |
| dot-add_ci_lines | Add Confidence Interval Lines to Orchard Plot |
| dot-add_ghost_points | Add Ghost Points to Orchard Plot |
| dot-column_exists | Check if Column Exists |
| dot-column_is_categorical | Check if Column is Categorical |
| dot-create_tmp_phylo_matrix | Create Temporary Phylogenetic Matrix For Leave-One-Out... |
| dot-create_tmp_vcv | Create Temporary Variance-Covariance Matrix |
| dot-get_effectsizes | Get Leave-One-Out Effect Sizes |
| dot-get_estimates | Get Leave-One-Out Model Estimates |
| dot-is_group_valid | Validate Group Argument |
| dot-is_metafor_object | Check if Object is from metafor Package |
| dot-is_model_valid | Validate Model Argument |
| dot-prune_tree | Prune Phylogenetic Tree For Leave-One-Out Analysis |
| dot-run_leave1out | Fit Multiple Meta-Analytic Models For Leave-One-Out Analysis |
| dot-set_color_palette | Set Color Palette for Orchard Plot |
| dot-validate_phylo_args | Validate Phylogenetic Arguments |
| dot-validate_robust_args | Validate Robust Variance Estimation Arguments |
| dot-validate_vcalc_args | Validate Variance-Covariance Calculation Arguments |
| eklof | eklof |
| english | english |
| firstup | firstup |
| fish | fish |
| geom_pub_stats_naka | geom_pub_stats_naka |
| geom_pub_stats_yang | geom_pub_stats_yang |
| get_data_raw | get_data_raw |
| get_data_raw_cont | get_data_raw_cont |
| get_ints_dat | get_ints_dat |
| i2_ml | i2_ml |
| is_categorical | Check if an Object is Categorical |
| leave_one_out | Leave-One-Out Analysis for Meta-Analytic Models |
| lim | lim |
| m1_ml | m1_ml |
| m2_ml | m2_ml |
| matrix_i2 | matrix_i2 |
| ml_cvh1 | ml_cvh1 |
| ml_cvh2 | ml_cvh2 |
| ml_m1 | ml_m1 |
| ml_m2 | ml_m2 |
| model_is_valid | Validate 'model' |
| mod_is_valid | Validate 'mod' |
| mod_results | mod_results |
| num_studies | num_studies |
| orchard_leave1out | Orchard Plot for Leave-One-Out Analysis |
| orchard_plot | orchard_plot |
| phylo_matrix | phylo_matrix |
| pipe | Pipe operator |
| pottier | pottier |
| pred_interval_esmeans | pred_interval_esmeans |
| print.orchard | print.orchard |
| pub_bias_plot | pub_bias_plot |
| R2_calc | R2_calc |
| r2_ml | r2_ml |
| ratio_i2 | ratio_i2 |
| submerge | submerge |
| transf_ift | Freeman-Tukey (Double Arcsine) Transformation for proportions |
| transf_inv_ft | Inverse Freeman-Tukey (Double Arcsine) Transformation for... |
| transf_invlogit | Inverse Logit Transformation |
| transform_data | Apply a Transformation to Vector |
| transf_percent | Percentage Transformation |
| transf_percentr | Percentage Relative Change Transformation |
| transf_tanh | Hyperbolic Tangent Transformation |
| VCV_dARR | VCV_dARR |
| weighted_var | weighted_var |
| Zr_to_r | Zr_to_r |
