UseRaw_afterFilter: Use raw count from the DataPrep object which genes are...

Description Usage Arguments Value Examples

View source: R/analyze.R

Description

function to keep raw counts after filtering and/or normalizing.

Usage

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UseRaw_afterFilter(DataPrep, DataFilt)

Arguments

DataPrep

DataPrep object returned by TCGAanalyze_Preprocessing()

DataFilt

Filtered data frame containing samples in columns and genes in rows after normalization and/or filtering steps

Value

Filtered return object similar to DataPrep with genes removed after normalization and filtering process.

Examples

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## Not run: 
  dataPrep_raw <- UseRaw_afterFilter(dataPrep, dataFilt)

## End(Not run)

daniel615212950/TCGAbiolinks documentation built on Dec. 19, 2021, 8:06 p.m.