top_data: Retain only top SNPs by variance explained
In danjlawson/robustarchitecture: Estimate Genomic Architecture parameters using robust statistics
Description
Usage
Arguments
Value
See Also
View source: R/ArchitectureSimulate.R
Description
Filter data to keep only the top k by proportion of variance explained, which must be provided in a column called 'propexplained'.
Usage
1
top_data(testdata, k = 100)
Arguments
testdata
The data frame containing frequency in the first column.
k
The number of SNPs to retain
Value
A dataframe the same shape as provided with only the top k SNPs.
See Also
make_test_data which simulates the data and gives a complete example.
danjlawson/robustarchitecture documentation built on Dec. 19, 2021, 8:09 p.m.
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Description Usage Arguments Value See Also
View source: R/ArchitectureSimulate.R
Description
Filter data to keep only the top k by proportion of variance explained, which must be provided in a column called 'propexplained'.
Usage
1 | top_data(testdata, k = 100)
|
Arguments
testdata |
The data frame containing frequency in the first column. |
k |
The number of SNPs to retain |
Value
A dataframe the same shape as provided with only the top k SNPs.
See Also
make_test_data which simulates the data and gives a complete example.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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