topdata: Simulated summary data with Genomic Architecture

In danjlawson/robustarchitecture: Estimate Genomic Architecture parameters using robust statistics

Description

Simulated data using s=-0.5 and only the top 10% (10k) SNPs retained by variance explained. This masking leads to a complex inference problem typical of real data, but is not a problem for the link{genomicarchitecture} approach.

Format

An data frame containing 4 columns, "f","beta","varexplained","propexplained". Only the first two are required for inference.

See Also

make_test_data to generate your own simulated data, and top_data to threshold it. fullsearch to perform inference and architectureplot to plot the results.

Examples

## Not run: 
data(topdata)
topres=fullsearch(dat=topdata)
architectureplot(topdata,topres)

## End(Not run)

danjlawson/robustarchitecture documentation built on Dec. 19, 2021, 8:09 p.m.