getClusters: Gets the descendant nodes of a phylogeny at a given time...
In darunabas/bioregion: an R package for mapping biodiversity and conservation
Description
Usage
Arguments
Value
References
Examples
Description
getClusters returns the tips that descend from a given node or time depth on a dated phylogenetic tree.
Usage
1
getClusters(tree, cut = 2, ...)
Arguments
tree
is a dated phylogenetic tree with branch lengths stored as a
phylo object (as in the ape package).
Value
A list of descendants
References
\insertRefSchliep2010bioregion
Examples
1
2
3
4
5
6
require(phylobase)
geo <- get(data(geospiza))
tree <- geo$tree
plot(tree)
axisPhylo(side = 1)
getClusters(tree, .3)
darunabas/bioregion documentation built on Oct. 27, 2019, 6:57 a.m.
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Description Usage Arguments Value References Examples
Description
getClusters returns the tips that descend from a given node or time depth on a dated phylogenetic tree.
Usage
1 | getClusters(tree, cut = 2, ...)
|
Arguments
tree |
is a dated phylogenetic tree with branch lengths stored as a
phylo object (as in the |
Value
|
A list of descendants |
References
\insertRefSchliep2010bioregion
Examples
1 2 3 4 5 6 | require(phylobase)
geo <- get(data(geospiza))
tree <- geo$tree
plot(tree)
axisPhylo(side = 1)
getClusters(tree, .3)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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